Table 5

Selected tests of within-family association with at least one phenotype with P-value ≤0

Chromosome

Marker

Nucleotide position

Minor allele/MAF in our data

PMD_res

DA_res

NDA_res

Allele with higher MD

1

rs1526480

91,209,986

0.39 (G)

0.041

0.71

4.00e-4

A

2

rs715271

57,133,410

0.32 (C)

5.00e-4

0.0019

0.024

A

7

rs723149

46,543,581

0.43 (A)

5.50e-5

2.00e-4

0.035

A

8

rs4317547

141,285,098

0.27 (A)

7.77e-5

.0016

2.00e-4

A

12

rs1012315

97,639,144

0.29 (A)

3.00e-4

7.00e-4

0.018

G

14

rs764602

49,480,419

0.48 (A)

0.022

0.35

3.00e-4

G

14

rs1959064

57,044,005

0.32 (G)

0.036

2.00e-4

0.045

A

20

rs7272911

35,946,239

0.30 (A)

0.0041

0.091

1.00e-4

G

Greenwood et al. Breast Cancer Research 2011 13:R132   doi:10.1186/bcr3078