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Resolution: standard / high Figure 1.
Amplification of Epstein-Barr virus (EBV) from DNA isolated from breast cancer and
blood specimens. Real time PCR using minor groove binding (MGB)-TaqMan technology
was used to quantify the viral load contained in the samples. Internal repeat region
(IR)1 target sequences showed that this probe amplified its respective target over
a broad range and detected low levels (2.3 EBV genomes per reaction; unpublished observation).
(a) A characteristic amplification plot showing the change in fluorescence (ΔRn) as a
function of amplification cycle. The horizontal red line indicates the fluorescence
at 10× the standard deviation of the control. The upper left arrow indicates the fluorescence
detected from Daudi, an EBV-associated endemic Burkitt lymphoma. The lower arrow indicates
the fluorescence of a negative control (water). The amplification, in triplicate,
of the DNA from each of the patient tumor samples is indicated. (b) The standard was constructed to contain from 2 to 200,000 copies of EBV genome. The
graph shows the linear regression of the Cts (the PCR cycle number when the amplification
fluorescence value reaches and exceeds the predetermined background threshold value)
using each of the standards. This characteristic standard line had an r2 = 0.995 with a slope of -3.2.
Perkins et al. Breast Cancer Research 2006 8:R70 doi:10.1186/bcr1627 |